June 13, 2013
Graphs are everywhere!

I met some wonderful people over the two days at #GraphConnect Chicago. Loved hanging out with these smart and passionate people. Their passion is contagious enough to want me to conjure up a database tonight!


Here are a couple of snaps from the event and walks around Chicago.

#1 At the end of day one. On my way back to hostel.

#2 At the end of day one. On my way back to hostel.

#3 Day 2. Max De Marzi giving a quick walk-through of building a social search a la Facebook Graph Search using Neo4j.

#4 Day 2. Jim Webber giving a preview of what’s to come for Neo4j v2.0

#5 Day 2. Jim Webber and GraphConnect’s Oprah moment

BONUS:One of many funny moments in Jim’s talk.

“Tables? Meh.”

June 8, 2013
Moylan’s Old Blarney Blarleywine Style Ale.
Had this for the first time today, and I definitely recommend it for the fans of hoppy beers. It’s not the hoppiest of all, but it keeps the taste buds coming back for another sip. I recommend it. Thanks to a good lady friend for this recommendation.

Moylan’s Old Blarney Blarleywine Style Ale.


Had this for the first time today, and I definitely recommend it for the fans of hoppy beers. It’s not the hoppiest of all, but it keeps the taste buds coming back for another sip. I recommend it. Thanks to a good lady friend for this recommendation.

June 1, 2013
A good Saturday morning. at Dutch Oven Bakery – View on Path.

A good Saturday morning. at Dutch Oven Bakery – View on Path.

May 31, 2013
Observing life and the world around us.
nawasaka:

we live in a generation of not being in love and not being togetherbut we sure make it feel like we’re togethercause we’re scared to see each other with somebody else

Observing life and the world around us.

nawasaka:

we live in a generation of not being in love and not being together
but we sure make it feel like we’re together
cause we’re scared to see each other with somebody else

(Source: insttagram)

May 19, 2013
Masters of the Wind with George Brooks, Ronu Majumdar, and Ramdas Palsule. at Ames City Auditorium – View on Path.

Masters of the Wind with George Brooks, Ronu Majumdar, and Ramdas Palsule. at Ames City Auditorium – View on Path.

May 9, 2013
Time for omelette and hash browns. at The Grove – View on Path.

Time for omelette and hash browns. at The Grove – View on Path.

May 9, 2013

runej asked: link to CHDKS80e.exe is broken. Do you happen to have the file? - Thanks. Rune

Oh no! I don’t have the file anymore. Sorry. I got rid of the camera some time ago, so I let go of those files as well. If I find it, I’ll be sure to update the article. Thanks for pointing this out.

May 7, 2013
jtotheizzoe:

Imagine Reading by the Light of a Plant …
That’s just what Antony Evans and the team behind the Glowing Plant Kickstarter have in mind. And you can help them get there (and get your own glowing plant in return!)
Molecular biologists have used bioluminescence as a laboratory technique for decades. This light-producing reaction (different from the fluorescence given off by jellyfish and other “glowing” organisms like the GFP-labeled tobacco plant above) is stunningly simple, using proteins isolated from fireflies and glow-worms to create light using only oxygen and a molecule called luciferin. I’ve done it myself dozens of times, it’s pretty cool.
Modern synthetic biology techniques give us the power to insert this gene into the genome of almost any organism whose genes we can manipulate. Arabidopsis thaliana, the so-called plant “model organism” is one of those. Using special plant-specific bacteria, we can insert genes into the tiny weed at will. Since every living thing expresses RNA and protein using the same genetic code, all Evans and his team need to do is tweak the precise DNA sequence, letter by letter, to make it work as efficiently in plants as it does in other organisms. It’s harder than it sounds, of course, but well within the realm of the possible.
Their fundraising campaign has already been so successful that they have expanded their goal to making a glowing rose! I’d buy that for a dollar. Visit their Kickstarter to learn more and to get your name on the list for a glowing plant. The Glowing Plant project is also on Tumblr, so go give them some love and follow for more news. 
These green-thumbed bio-hackers are imagining a world without streetlights, where we read without a light on our nightstand but instead a glowing plant in our room. I’d like to see that happen.

Glowing plants. It’s actually happening! Last year when I heard about this, it sounded like a cool grad student project. And now it’s a full-fledged product. Cool!

jtotheizzoe:

Imagine Reading by the Light of a Plant …

That’s just what Antony Evans and the team behind the Glowing Plant Kickstarter have in mind. And you can help them get there (and get your own glowing plant in return!)

Molecular biologists have used bioluminescence as a laboratory technique for decades. This light-producing reaction (different from the fluorescence given off by jellyfish and other “glowing” organisms like the GFP-labeled tobacco plant above) is stunningly simple, using proteins isolated from fireflies and glow-worms to create light using only oxygen and a molecule called luciferin. I’ve done it myself dozens of times, it’s pretty cool.

Modern synthetic biology techniques give us the power to insert this gene into the genome of almost any organism whose genes we can manipulate. Arabidopsis thaliana, the so-called plant “model organism” is one of those. Using special plant-specific bacteria, we can insert genes into the tiny weed at will. Since every living thing expresses RNA and protein using the same genetic code, all Evans and his team need to do is tweak the precise DNA sequence, letter by letter, to make it work as efficiently in plants as it does in other organisms. It’s harder than it sounds, of course, but well within the realm of the possible.

Their fundraising campaign has already been so successful that they have expanded their goal to making a glowing rose! I’d buy that for a dollar. Visit their Kickstarter to learn more and to get your name on the list for a glowing plant. The Glowing Plant project is also on Tumblr, so go give them some love and follow for more news.

These green-thumbed bio-hackers are imagining a world without streetlights, where we read without a light on our nightstand but instead a glowing plant in our room. I’d like to see that happen.

Glowing plants. It’s actually happening! Last year when I heard about this, it sounded like a cool grad student project. And now it’s a full-fledged product. Cool!

April 21, 2013

This brought tears to my eyes.

(via NZ parliament erupts in song after passing marriage equality bill - Boing Boing)

April 18, 2013
8th row seat. An epic evening at Stephens Auditorium. Montreal Guitar Trio and California Guitar Trio, Live! at Stephens Auditorium – View on Path.

8th row seat. An epic evening at Stephens Auditorium. Montreal Guitar Trio and California Guitar Trio, Live! at Stephens Auditorium – View on Path.

April 15, 2013
Research Gazette, Ep. 2

Here are today’s interesting finds.

Expartistan - Cost of Living Index
http://www.expatistan.com/cost-of-living

RNA: messenger, mediator, muter, and more.
RNA subspecies: identities and roles
http://www.oxbridgebiotech.com/review/basics/rna-messenger-mediator-muter/

Will it Python? Doing R data analysis in Python.
http://slendrmeans.wordpress.com/will-it-python/

Visualize large data sets with the bigvis package
http://blog.revolutionanalytics.com/2013/04/visualize-large-data-sets-with-the-bigvis-package.html

Ayadi
http://www.ayasdi.com/product/

(See Gazette FAQ for information about Research Gazette.)

April 12, 2013
Best tacos and burritos in town. at Mr. Burrito – View on Path.

Best tacos and burritos in town. at Mr. Burrito – View on Path.

April 7, 2013
Have you ever seen an atom?? (Source :The Nature Video Channel)

http://youtu.be/yqLlgIaz1L0

(from Rahul Roy)

March 25, 2013
“Artistic fabric renderings of cellular images”

http://www.cell.com/cell_picture_show-weaving?utm_source=ECE001&utm_campaign=&utm_content=&utm_medium=email&bid=Q5ICI4F:Z7OCW2F

(Thanks Rahul)

March 24, 2013
Research Gazette, Ep. 1

Here are today’s interesting finds.

Researchers identify genetic sequence that helps to coordinate synthesis of DNA-packaging proteins
http://phys.org/news/2013-03-genetic-sequence-synthesis-dna-packaging-proteins.html

If you want to get ahead, be a night owl.
New research suggests being early to rise won’t make you wealthy or wise
http://www.independent.co.uk/life-style/health-and-families/health-news/if-you-want-to-get-ahead-be-a-night-owl-8547115.html

Peach genome offers insights into breeding strategies for biofuels crops
http://www.eurekalert.org/pub_releases/2013-03/dgi-pgo032013.php

Matplotlib and the Future of Visualization in Python
http://jakevdp.github.com/blog/2013/03/23/matplotlib-and-the-future-of-visualization-in-python/

Python data tools just keep getting better
http://strata.oreilly.com/2013/03/python-data-tools-just-keep-getting-better.html

(See Gazette FAQ for information about Research Gazette.)

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